Select a dataset to download and view interactions

Dataset Description # Interactions
BioPlex 1.0 Interaction List (Published) Summary of protein interactions in the BioPlex 1.0 Network as published in Huttlin et al. (2015) Cell 162(2):425. ~24,000
BioPlex 2.0 Interaction List (Published) Summary of protein interactions in the BioPlex 2.0 Network as published in Huttlin et al. (2017) Nature doi: 10.1038/nature22366 ~56,000
Unpublished BioPlex Interactions Summary of protein interactions in the BioPlex network following reanalysis of all data from BioPlex 2.0 plus an additional ~1500 unpublished AP-MS experiments.NOTE: This unpublished data is provided as a resource to enable researchers to obtain information on individual proteins. With proper attribution, we highly encourage publication of targeted biological studies that follow up on individual complexes and interactions. However, we request that users refrain from publishing large-scale analysis or data mining studies focusing on this network until we have published its contents in a peer-reviewed journal. ~73,000

Download unfiltered BioPlex protein-protein interaction data

Select a dataset to download and view candidate interactions prior to filtering to remove background

Dataset Description Reference
BioPlex 2.0 Unfiltered Interaction List Summary of all potential interactions in the BioPlex 2.0 Network. WARNING: this list has not been filtered to remove background and nonspecific interactors. Use with caution. Huttlin et al. (2017) Nature doi: 10.1038/nature22366
* Note: the files in this table HAVE NOT been filtered to remove non-specific interacting proteins and background.

Quarterly updates

Year Quarter Date First-pass baits
1 Q1 12/01/2015 362
1 Q2 05/01/2016 299
1 Q3 08/01/2016 325
1 Q4 12/01/2016 299